Photochemistry of 2-aminooxazole: a matrix-isolation and computational study of a putative key prebiotic molecule


Nunes C. M., Viegas L. P., Tripathi A., Braz S., FAUSTO R.

Physical Chemistry Chemical Physics, vol.27, no.37, pp.20326-20333, 2025 (SCI-Expanded, Scopus) identifier identifier identifier

  • Publication Type: Article / Article
  • Volume: 27 Issue: 37
  • Publication Date: 2025
  • Doi Number: 10.1039/d5cp02936h
  • Journal Name: Physical Chemistry Chemical Physics
  • Journal Indexes: Science Citation Index Expanded (SCI-EXPANDED), Scopus, Chemical Abstracts Core, Chimica, Communication Abstracts, Compendex, INSPEC, MEDLINE
  • Page Numbers: pp.20326-20333
  • Istanbul Kültür University Affiliated: Yes

Abstract

2-Aminooxazole 1 is a key intermediate in plausible prebiotic pathways to activated pyrimidine ribonucleotides. However, its photochemistry and underlying reaction mechanism remain unclear. Here, we present a combined matrix-isolation infrared spectroscopic and computational investigation of the UV-induced photochemistry of 1. Narrowband irradiation at 220 nm of 1 isolated in cryogenic Ar or N2 matrices leads mainly to 3-amino-1-formyl nitrile ylide. Minor products included 3-amino-2-formyl-2H-azirine and, most likely, two tautomeric 2-iminooxazoles. The nitrile ylide photoreverts to 1 (380 nm), whereas 2-formyl-2H-azirine photoisomerizes to imidoylketene (320 nm). Spin–flip time-dependent density functional (SF-TDDFT) computations reveal a cascade of conical intersections following excitation to the S2 state of 1, providing a mechanistic explanation for the observed C–O ring-opening and predominant formation of the nitrile ylide. Overall, these findings elucidate the photoreactivity mechanism of 2-aminooxazole and can contribute to understanding the behavior of this pivotal molecule under early Earth UV conditions.